CDS

Accession Number TCMCG023C18543
gbkey CDS
Protein Id PIN08691.1
Location join(39535..40068,40384..40688,42062..42279,42559..42635,42927..43091,43855..44619,45637..45747,45821..46081,46164..46387,46869..47079)
Organism Handroanthus impetiginosus
locus_tag CDL12_18732

Protein

Length 956aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01003734.1
Definition Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4 [Handroanthus impetiginosus]
Locus_tag CDL12_18732

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair endonuclease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10848        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03420        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000014        [VIEW IN EMBL-EBI]
GO:0000109        [VIEW IN EMBL-EBI]
GO:0000110        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901255        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTACGGTTCCACGAGCACATTATCAGCGACCTCATGGAGGACCCTAGCGGCGGCCTCGTAGTCCTCTCCGCCGGCCTCGGCCTCCCCAAGCTTATATCGTCCCTCCTTACACTCCATGACCCTTCCCAGGGTTCGGTGCTCATTCTTAACGCCTCTTCTTCCCAGAAGAATTCCATCGACATCAATTCTCACTTCTCTTCCATCACCTCCGACCTCCCCGCGCACCACCGCCTCTCCCTCTACACCTCTGGTGGGATCTTCTTCATCACCGCTCGGATTCTCATTGTCGATTTGCTCACGCAACGTCTCCCCACTACTTCGGTCGCCGGGATTATACTACTTAATGCTCATTCTATTTCGGATACTTCAACTGAGGCTTTCATTGTTCGGATTCTGCGGTCTTCGAATAGGTCTCTCTATGTTCGAGCCTTCTCCGACCGCCCCCACGCTATGGTCTCCGGCTTTGCTAAAGCTGAGCGGACCCTCAAGTGCCTTTTTCTACGTAAACTCCATCTCTGGCCTAGATTTCAGGTATATGTTTCCCAGGATTTGGAAAAAGATCCTCCGGAGGTAATAGACATTCGGGTCCCAATGTCACCCCACATGATTGGGATTCAGAAAGCAGTGATCGAAGTGATGGATGCATGTCTAAAGGAGATGAGGAAGACTAATAAGGTTGATGTAGAGGATTTGACTGTAGAGAACGGTTTGTTCAAGTCATTTGACGAGATTGTAAGGAGGCAATTGGATCCTATATGGCATACATTAGGGAAGAGGACGAAGCAGCTGGTTTCAGACTTGAAGACATTACGGAAGTTGTTGGATTATCTTTCCAGGTATGATGCAGTGACTTACCTGAAGTATCTGGACTCGCTTAGAGCCTCTGAGAGTTTTCGATCTGTTTGGATCTTTGCTGAGTCTAGTTACAAGATTTTTGAGTATGCAAAGAAGCGGGTTTATCACTTTGGTAGGTCAGATAGTGGGAAATCAATTGGAATGAGTACAGCCACATCCGCCCGCAAGAGGAAACTAGAGGAAAGGAAGAATGGAGATGATTCTTCAGCAAGTGCAAATAGCGTGGTAGTTTTGCAAGAAATCTTGGAAGAACCGCCAAAGTGGAAGGTGTTGCGTGACATTCTCGTAGAGATTCAAGAGGAAAGACAGAAGCAAGCAGTGTCAGGTGAAGAACTAATAGCTGGATGTGACGAGGATCTGAATGGAATTATTCTTGTGGCATGCAAGGATGAACGTTCCTGCATGCAGCTTCAAGATTGCATTACTAAAGGCCACCATAAGGTCATGCACGAGGAATGGGAGAAATATTTGCTGAGTAAAGTGGAGCTGCAGGCTTTACCAAAATCTAGCAAAAAGAAACCAAAGGCACCTAAAGGTTTTGGAATTCTCGATGGCGTAATTCCTTCTGTTTCCGGACAAAAAGCTGAAGTTAGTAGCATAAGCAAGCAAGAGAATGATGCACTGCTGGCAGCAGCATATGAAATAAGTAAACAAGCGAATAAGGATACTGGAGTTGAACATAGTGGGGCCAGTGAAGAACATGGTAAAGGACGGAAAAACCGAAGAAAGAAGAAAAAACCAATTATTGGTAAAACTGATCAGGAGTCTGAAACTAGTGTTCAGTCTAAGACTTCACCCTCAAAACATAAAGACAAAGTAAATGAGCATCTATCAATTTCTGGTAATGTTCATGGCAATTCAACTGAAAGTGAGTACTTGGATAGAGTGGTTCTTCGAAAGCATAATCAGGAGCCTGAAAATACTAGCCAGCTCCCATCAGTACATTTCCATGCCTTGGAGAGTGAACAGAATATACTTGATGTTTTACAGCCTTCTGTCATAATTGTTTACCACCCTGACATGGCGTTTGTTAGGGAAATTGAAATTTACAAATCTGAAAATCCCTCAAAGAGATTGAAAGTATACTTTCTATTCTATGAAGATTCTACTGAGATTCGGAAATTTGAGGCAAGTGTGCGTAGAGAAAATGGAGCATTTGAGTCCCTGATCAGGCAGAAATCTCTGATGATGATACCAGTTAGTCAGGATGAGCAGCTTCTAAGCATAGGTTCTTCAGTAGAGCCGCAATCAGTCACGGCGCAAAATTTGATTACTAGAAAAGCTGGTGGGAAGAAGGAAGCAGAAAAGGAAATGCAGATCATCGTGGACATGAGGGAATTTATGAGCAGCCTGCCAAATGTGCTCCACCAGAAAGGCATGCATATTATACCAGTGACTCTGGAAGTAGGAGATTACATACTATCCCCATTGATATGTGTTGAACGTAAGAGTATACAAGATCTTTTTGGCAGTTTTTCCTCCGGTCGTTTATATCACCAGGTGGAAATGATGTCACGTTATTACCGAATACCTGTTCTGCTGATCGAATTTTCGCAAGATAAAAGCTTCTCATTTCAGTCTGCAAGTGAGATTGGTGATGATGTCACACCAAATAGCATTATATCCAAGTTGTCGCTGCTTGTTCTCCATTTTCCTCGTCTGCGTATTGTCTGGTCTCGTAGTTTGCATGCTACTGCTGAAATTTTCACTATGCTTAAAGCAAATCAGGATGAACCTGATGAGGCCAAGGCAATTAGAGTTGGTGTCCCATCAGAGGATGGCATCATTGAAAATGATGTTAGAGCTGAAAACTTCAACACGTCAGCCGTTGAGTTCCTTAGACGACTACCAGGAGTTACCGATTCCAACTACAGGTCGATAATGGATGGGTGTAAAAGCTTGGCGGAACTTGCCCTACTTCCAATAGAGAAGTTAGCAGACTTGATGGGGGGTCAGAAAGCAGCAAAAACCTTGAGAGATTTTCTTGATGCCAAGTATCCAACCTTACTTTAG
Protein:  
MVRFHEHIISDLMEDPSGGLVVLSAGLGLPKLISSLLTLHDPSQGSVLILNASSSQKNSIDINSHFSSITSDLPAHHRLSLYTSGGIFFITARILIVDLLTQRLPTTSVAGIILLNAHSISDTSTEAFIVRILRSSNRSLYVRAFSDRPHAMVSGFAKAERTLKCLFLRKLHLWPRFQVYVSQDLEKDPPEVIDIRVPMSPHMIGIQKAVIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLSRYDAVTYLKYLDSLRASESFRSVWIFAESSYKIFEYAKKRVYHFGRSDSGKSIGMSTATSARKRKLEERKNGDDSSASANSVVVLQEILEEPPKWKVLRDILVEIQEERQKQAVSGEELIAGCDEDLNGIILVACKDERSCMQLQDCITKGHHKVMHEEWEKYLLSKVELQALPKSSKKKPKAPKGFGILDGVIPSVSGQKAEVSSISKQENDALLAAAYEISKQANKDTGVEHSGASEEHGKGRKNRRKKKKPIIGKTDQESETSVQSKTSPSKHKDKVNEHLSISGNVHGNSTESEYLDRVVLRKHNQEPENTSQLPSVHFHALESEQNILDVLQPSVIIVYHPDMAFVREIEIYKSENPSKRLKVYFLFYEDSTEIRKFEASVRRENGAFESLIRQKSLMMIPVSQDEQLLSIGSSVEPQSVTAQNLITRKAGGKKEAEKEMQIIVDMREFMSSLPNVLHQKGMHIIPVTLEVGDYILSPLICVERKSIQDLFGSFSSGRLYHQVEMMSRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLVLHFPRLRIVWSRSLHATAEIFTMLKANQDEPDEAKAIRVGVPSEDGIIENDVRAENFNTSAVEFLRRLPGVTDSNYRSIMDGCKSLAELALLPIEKLADLMGGQKAAKTLRDFLDAKYPTLL